Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10501 and 10502 are separated by 326 nucleotides10502 and 10503 are separated by 131 nucleotides10503 and 10504 are separated by 287 nucleotides10504 and 10505 are separated by 656 nucleotides mRNA_2133: 10501 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,ProSiteProfiles-Zinc finger RanBP2 type profile.-PS50199,SMART-Zinc finger domain-SM00547,SUPERFAMILY--SSF90209, at 146,345 to 148,532 10501 mRNA_2134: 10502 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 148,859 to 150,709 10502 mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150,841 to 152,742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153,030 to 154,707 10504 mRNA_2137: 10505 - Hypothetical Protein, at 155,364 to 157,707 10505
Group Condition mRNA_2133 mRNA_2134 mRNA_2135 mRNA_2136 mRNA_2137
10501 10502 10503 10504 10505
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.6 +0.0 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 +0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.6 +0.3 +0.2 +0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 +0.3 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.2 +0.1 +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 -0.4 -0.1 +0.5
growth on ypd YPD +0.2 +0.0 +0.3 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 +0.1 -0.0 +0.2
auxotrophy Dropout Complete -0.1 +0.2 +0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.4 -0.3 +0.1 -0.5 +0.3
growth on oleic acid YNB Glucose +0.7 -0.7 +0.2 -0.0 -0.1
auxotrophy YNB Glucose -0.3 +0.5 +0.4 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.4 +0.1 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.2 +0.1 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 -0.0 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.3 +0.4 +0.0 -0.5
growth on oleic acid YNB Oleic Acid +0.5 -0.4 +0.2 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.1 +0.1 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.4 +0.2 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 +0.4 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.6 +0.3 -0.1 +0.7
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