Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10502 and 10503 are separated by 131 nucleotides10503 and 10504 are separated by 287 nucleotides10504 and 10505 are separated by 656 nucleotides10505 and 10506 are separated by 127 nucleotides mRNA_2134: 10502 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 148,859 to 150,709 10502 mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150,841 to 152,742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153,030 to 154,707 10504 mRNA_2137: 10505 - Hypothetical Protein, at 155,364 to 157,707 10505 mRNA_2138: 10506 - HMMPfam-Putative stress-responsive nuclear envelope protein-PF10281, at 157,835 to 161,101 10506
Group Condition mRNA_2134 mRNA_2135 mRNA_2136 mRNA_2137 mRNA_2138
10502 10503 10504 10505 10506
growth on oleic acid YNB Glucose -0.7 +0.2 -0.0 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.3 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.0 +0.1 -0.0 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4 -0.1 +0.5 -0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.1 -0.5 +0.3 +0.0
growth on ypd YPD +0.0 +0.3 -0.2 -0.4 -0.0
auxotrophy Dropout Complete +0.2 +0.1 -0.1 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 -0.1 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 -0.2 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 +0.0 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 -0.0 +0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.2 +0.2 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 -0.0 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 +0.0 -0.5 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 -0.2 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.0 +0.1 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.4 -0.0 -0.1 -0.1
auxotrophy YNB Glucose +0.5 +0.4 -0.3 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 +0.0 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.3 -0.1 +0.7 -0.3
remove
mRNA_2134
plot
remove
mRNA_2135
plot
remove
mRNA_2136
remove
mRNA_2137
plot
remove
mRNA_2138
plot