Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10503 and 10504 are separated by 287 nucleotides10504 and 10505 are separated by 656 nucleotides10505 and 10506 are separated by 127 nucleotides10506 and 10507 are separated by 275 nucleotides mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150,841 to 152,742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153,030 to 154,707 10504 mRNA_2137: 10505 - Hypothetical Protein, at 155,364 to 157,707 10505 mRNA_2138: 10506 - HMMPfam-Putative stress-responsive nuclear envelope protein-PF10281, at 157,835 to 161,101 10506 mRNA_2139: 10507 - K09377 CSRP cysteine and glycine-rich protein, at 161,377 to 162,483 10507
Group Condition mRNA_2135 mRNA_2136 mRNA_2137 mRNA_2138 mRNA_2139
10503 10504 10505 10506 10507
auxotrophy Dropout Complete +0.1 -0.1 -0.1 -0.3 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 -0.3 -0.0 -0.4
growth on ricinoleic acid YNB Glucose +0.1 -0.5 +0.3 +0.0 -0.6
auxotrophy YNB Glucose +0.4 -0.3 -0.1 -0.0 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.2 -0.2 -0.0 -0.3
growth on ypd YPD +0.3 -0.2 -0.4 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 -0.2 -0.2 -0.1
growth on oleic acid YNB Glucose +0.2 -0.0 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.0 -0.5 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.0 -0.1 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 +0.4 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.0 -0.0 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +0.2 +0.3 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 +0.4 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 -0.0 +0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 +0.3 +0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 +0.7 -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1 +0.5 -0.2 +0.7
growth on oleic acid YNB Oleic Acid +0.2 +0.2 +0.3 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 +0.1 +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.1 +0.1 +0.4
remove
mRNA_2135
plot
remove
mRNA_2136
plot
remove
mRNA_2137
remove
mRNA_2138
plot
remove
mRNA_2139
plot