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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10504 and 10505 are separated by 656 nucleotides
10505 and 10506 are separated by 127 nucleotides
10506 and 10507 are separated by 275 nucleotides
10507 and 10508 are separated by 441 nucleotides
mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153,030 to 154,707
10504
mRNA_2137: 10505 - Hypothetical Protein, at 155,364 to 157,707
10505
mRNA_2138: 10506 - HMMPfam-Putative stress-responsive nuclear envelope protein-PF10281, at 157,835 to 161,101
10506
mRNA_2139: 10507 - K09377 CSRP cysteine and glycine-rich protein, at 161,377 to 162,483
10507
mRNA_2140: 10508 - HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383, at 162,925 to 174,925
10508
Group
Condition
mRNA
_2136
mRNA
_2137
mRNA
_2138
mRNA
_2139
mRNA
_2140
10504
10505
10506
10507
10508
auxotrophy
Dropout Complete
-0.1
-0.1
-0.3
-0.6
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.3
-0.0
-0.4
-0.1
auxotrophy
YNB Glucose
-0.3
-0.1
-0.0
-0.5
-0.0
growth on ricinoleic acid
YNB Glucose
-0.5
+0.3
+0.0
-0.6
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
-0.0
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.5
+0.0
-0.1
-0.0
growth on oleic acid
YNB Glucose
-0.0
-0.1
-0.1
-0.1
-0.1
growth on ypd
YPD
-0.2
-0.4
-0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
-0.1
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.2
-0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.4
-0.1
-0.5
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.3
+0.0
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.0
+0.1
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.2
+0.3
-0.5
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
+0.0
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.7
-0.3
-0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.4
-0.3
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
+0.2
+0.3
-0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
+0.1
+0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
+0.1
+0.4
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.5
-0.2
+0.7
-0.0
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