Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10505 and 10506 are separated by 127 nucleotides
10506 and 10507 are separated by 275 nucleotides
10507 and 10508 are separated by 441 nucleotides
10508 and 10509 are separated by 931 nucleotides
mRNA_2137: 10505 - Hypothetical Protein, at 155,364 to 157,707
10505
mRNA_2138: 10506 - HMMPfam-Putative stress-responsive nuclear envelope protein-PF10281, at 157,835 to 161,101
10506
mRNA_2139: 10507 - K09377 CSRP cysteine and glycine-rich protein, at 161,377 to 162,483
10507
mRNA_2140: 10508 - HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383, at 162,925 to 174,925
10508
mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175,857 to 177,524
10509
Group
Condition
mRNA
_2137
mRNA
_2138
mRNA
_2139
mRNA
_2140
mRNA
_2141
10505
10506
10507
10508
10509
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.0
-0.4
-0.1
-0.2
auxotrophy
Dropout Complete
-0.1
-0.3
-0.6
-0.0
+0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.0
-0.3
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
+0.3
+0.0
-0.6
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.1
-0.5
-0.0
-0.2
auxotrophy
YNB Glucose
-0.1
-0.0
-0.5
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
-0.1
-0.0
+0.2
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
-0.0
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+0.0
-0.1
-0.0
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.0
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.3
-0.2
+0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.3
-0.5
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
+0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.0
+0.0
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.7
-0.3
-0.3
+0.1
+0.1
growth on ypd
YPD
-0.4
-0.0
+0.1
+0.1
+0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.4
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.1
-0.3
+0.1
+0.8
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
+0.4
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-0.2
+0.7
-0.0
+0.3
remove
mRNA_2137
plot
remove
mRNA_2138
plot
remove
mRNA_2139
remove
mRNA_2140
plot
remove
mRNA_2141
plot