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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10507 and 10508 are separated by 441 nucleotides
10508 and 10509 are separated by 931 nucleotides
10509 and 10510 are separated by 1519 nucleotides
10510 and 10511 are separated by 347 nucleotides
mRNA_2139: 10507 - K09377 CSRP cysteine and glycine-rich protein, at 161,377 to 162,483
10507
mRNA_2140: 10508 - HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383, at 162,925 to 174,925
10508
mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175,857 to 177,524
10509
mRNA_2142: 10510 - Hypothetical Protein, at 179,044 to 180,564
10510
mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180,912 to 181,824
10511
Group
Condition
mRNA
_2139
mRNA
_2140
mRNA
_2141
mRNA
_2142
mRNA
_2143
10507
10508
10509
10510
10511
growth on ricinoleic acid
YNB Glucose
-0.6
-0.1
-0.1
+0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.0
-0.2
+0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.1
+0.0
-0.3
+0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.2
-0.3
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
-0.1
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.1
-0.2
-0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.1
+0.1
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
-0.0
-0.1
-0.1
auxotrophy
Dropout Complete
-0.6
-0.0
+0.2
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.1
-0.3
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
+0.2
-0.2
-0.0
auxotrophy
YNB Glucose
-0.5
-0.0
+0.3
+0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.0
-0.0
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.0
+0.4
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
+0.4
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.0
-0.0
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.1
+0.1
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.1
-0.0
+0.1
-0.2
growth on ypd
YPD
+0.1
+0.1
+0.7
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.1
+0.8
-0.2
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.0
+0.3
+0.3
+0.2
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