Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10507 and 10508 are separated by 441 nucleotides10508 and 10509 are separated by 931 nucleotides10509 and 10510 are separated by 1519 nucleotides10510 and 10511 are separated by 347 nucleotides mRNA_2139: 10507 - K09377 CSRP cysteine and glycine-rich protein, at 161,377 to 162,483 10507 mRNA_2140: 10508 - HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383, at 162,925 to 174,925 10508 mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175,857 to 177,524 10509 mRNA_2142: 10510 - Hypothetical Protein, at 179,044 to 180,564 10510 mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180,912 to 181,824 10511
Group Condition mRNA_2139 mRNA_2140 mRNA_2141 mRNA_2142 mRNA_2143
10507 10508 10509 10510 10511
growth on ricinoleic acid YNB Glucose -0.6 -0.1 -0.1 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.0 -0.2 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.1 +0.0 -0.3 +0.1
growth on oleic acid YNB Glucose -0.1 -0.1 -0.2 -0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.1 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 -0.2 -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 +0.1 -0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -0.0 -0.1 -0.1
auxotrophy Dropout Complete -0.6 -0.0 +0.2 +0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 +0.2 -0.2 -0.0
auxotrophy YNB Glucose -0.5 -0.0 +0.3 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 -0.0 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 +0.4 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +0.4 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 +0.1 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.1 -0.0 +0.1 -0.2
growth on ypd YPD +0.1 +0.1 +0.7 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.1 +0.8 -0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.0 +0.3 +0.3 +0.2
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