Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10508 and 10509 are separated by 931 nucleotides10509 and 10510 are separated by 1519 nucleotides10510 and 10511 are separated by 347 nucleotides10511 and 10512 are separated by 289 nucleotides mRNA_2140: 10508 - HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383, at 162,925 to 174,925 10508 mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175,857 to 177,524 10509 mRNA_2142: 10510 - Hypothetical Protein, at 179,044 to 180,564 10510 mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180,912 to 181,824 10511 mRNA_2144: 10512 - Hypothetical Protein, at 182,114 to 183,256 10512
Group Condition mRNA_2140 mRNA_2141 mRNA_2142 mRNA_2143 mRNA_2144
10508 10509 10510 10511 10512
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -0.2 -0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 +0.2 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 +0.1 -0.3 -0.2
growth on oleic acid YNB Glucose -0.1 -0.2 -0.3 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.1 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.3 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -0.4 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 +0.0 +0.1
auxotrophy Dropout Complete -0.0 +0.2 +0.1 -0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.3 -0.1 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 -0.2 -0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 +0.1 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.0 +0.2 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 -0.2 +0.1 -0.1
auxotrophy YNB Glucose -0.0 +0.3 +0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.4 -0.4 +0.2 +0.4
growth on ypd YPD +0.1 +0.7 +0.2 -0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.3 +0.3 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.8 -0.2 +0.3 +0.2
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