Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10509 and 10510 are separated by 1519 nucleotides
10510 and 10511 are separated by 347 nucleotides
10511 and 10512 are separated by 289 nucleotides
10512 and 10513 are separated by 476 nucleotides
mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175,857 to 177,524
10509
mRNA_2142: 10510 - Hypothetical Protein, at 179,044 to 180,564
10510
mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180,912 to 181,824
10511
mRNA_2144: 10512 - Hypothetical Protein, at 182,114 to 183,256
10512
mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183,733 to 185,513
10513
Group
Condition
mRNA
_2141
mRNA
_2142
mRNA
_2143
mRNA
_2144
mRNA
_2145
10509
10510
10511
10512
10513
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
-0.0
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.4
-0.1
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
+0.1
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
-0.3
-0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.1
-0.1
+0.2
growth on oleic acid
YNB Glucose
-0.2
-0.3
+0.0
+0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
-0.3
-0.2
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
-0.2
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.2
-0.0
+0.0
+0.0
auxotrophy
Dropout Complete
+0.2
+0.1
-0.2
-0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.3
+0.1
+0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.2
-0.2
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
+0.0
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.2
+0.1
-0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
+0.1
+0.3
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
+0.1
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.4
+0.2
+0.4
+0.1
growth on ypd
YPD
+0.7
+0.2
-0.3
+0.2
+0.0
auxotrophy
YNB Glucose
+0.3
+0.1
-0.0
+0.0
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
-0.2
+0.3
+0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.3
+0.2
+0.2
+0.3
remove
mRNA_2141
plot
remove
mRNA_2142
plot
remove
mRNA_2143
remove
mRNA_2144
plot
remove
mRNA_2145
plot