Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10511 and 10512 are separated by 289 nucleotides10512 and 10513 are separated by 476 nucleotides10513 and 10514 are separated by 248 nucleotides10514 and 10515 are separated by 98 nucleotides mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180,912 to 181,824 10511 mRNA_2144: 10512 - Hypothetical Protein, at 182,114 to 183,256 10512 mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183,733 to 185,513 10513 mRNA_2146: 10514 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 185,762 to 187,254 10514 mRNA_2147: 10515 - K01719 hemD, UROS uroporphyrinogen-III synthase, at 187,353 to 188,300 10515
Group Condition mRNA_2143 mRNA_2144 mRNA_2145 mRNA_2146 mRNA_2147
10511 10512 10513 10514 10515
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 -0.1 -1.7 N.D.
growth on ricinoleic acid YNB Glucose -0.3 -0.2 +0.3 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 +0.0 -0.8 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 +0.4 -0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.1 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 +0.1 -0.7 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.2 +0.3 -1.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 -0.0 -0.3 N.D.
auxotrophy YNB Glucose -0.0 +0.0 +0.4 -0.7 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 -0.0 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 +0.1 -0.3 N.D.
auxotrophy Dropout Complete -0.2 -0.2 +0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 +0.1 -0.9 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.2 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 +0.0 -0.2 N.D.
growth on oleic acid YNB Glucose +0.0 +0.1 +0.3 -0.6 N.D.
growth on ypd YPD -0.3 +0.2 +0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 +0.2 -0.7 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.1 +0.3 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.3 -0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +0.4 +0.1 N.D.
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