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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10521 and 10522 are separated by 234 nucleotides
10522 and 10523 are separated by 359 nucleotides
10523 and 10524 are separated by 536 nucleotides
10524 and 10525 are separated by 443 nucleotides
mRNA_2153: 10521 - K14003 PREB, SEC12 prolactin regulatory element-binding protein, at 200,588 to 202,509
10521
mRNA_2154: 10522 - KOG2689 Predicted ubiquitin regulatory protein, at 202,744 to 204,130
10522
mRNA_2155: 10523 - Hypothetical Protein, at 204,490 to 205,403
10523
mRNA_2156: 10524 - Hypothetical Protein, at 205,940 to 207,081
10524
mRNA_2157: 10525 - Hypothetical Protein, at 207,525 to 208,737
10525
Group
Condition
mRNA
_2153
mRNA
_2154
mRNA
_2155
mRNA
_2156
mRNA
_2157
10521
10522
10523
10524
10525
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.4
+0.3
-0.1
-0.4
growth on ypd
YPD
N.D.
+0.0
-0.2
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
-0.2
+0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
-0.1
+0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.0
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.4
+0.1
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
-0.2
+0.3
-0.2
auxotrophy
Dropout Complete
N.D.
-0.2
+0.0
+0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.0
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.0
-0.1
-0.1
+0.6
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.1
+0.2
+0.4
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.1
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
-0.1
+0.6
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.2
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.3
+0.0
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
-0.1
-0.0
+0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
+0.2
+0.5
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
+0.4
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.4
+0.1
+0.5
auxotrophy
YNB Glucose
N.D.
+0.1
+0.0
+0.6
+0.4
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