Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10527 and 10528 are separated by 1677 nucleotides10528 and 10529 are separated by 233 nucleotides10529 and 10530 are separated by 339 nucleotides10530 and 10531 are separated by 233 nucleotides mRNA_2159: 10527 - K03263 EIF5A translation initiation factor 5A, at 216,179 to 217,701 10527 mRNA_2160: 10528 - KOG1018 Cytosine deaminase FCY1 and related enzymes, at 219,379 to 220,731 10528 mRNA_2161: 10529 - K03458 TC.NCS2 nucleobase-cation symporter-2, NCS2 family, at 220,965 to 223,272 10529 mRNA_2162: 10530 - K15027 EIF2D translation initiation factor 2D, at 223,612 to 225,989 10530 mRNA_2163: 10531 - K18468 VPS35 vacuolar protein sorting-associated protein 35, at 226,223 to 229,992 10531
Group Condition mRNA_2159 mRNA_2160 mRNA_2161 mRNA_2162 mRNA_2163
10527 10528 10529 10530 10531
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.7 +0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 +0.2 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.1 -0.7 N.D.
growth on oleic acid YNB Glucose N.D. +0.1 +0.1 -0.5 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.0 -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.1 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.0 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 +0.1 -0.5 N.D.
auxotrophy Dropout Complete N.D. +0.4 -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.4 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 -0.1 +0.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 +0.2 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.6 +0.0 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.2 -0.1 N.D.
auxotrophy YNB Glucose N.D. +0.2 +0.3 -0.3 N.D.
growth on ypd YPD N.D. +0.1 +0.5 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 +0.4 +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.3 +0.5 N.D.
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