Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10528 and 10529 are separated by 233 nucleotides10529 and 10530 are separated by 339 nucleotides10530 and 10531 are separated by 233 nucleotides10531 and 10532 are separated by 200 nucleotides mRNA_2160: 10528 - KOG1018 Cytosine deaminase FCY1 and related enzymes, at 219,379 to 220,731 10528 mRNA_2161: 10529 - K03458 TC.NCS2 nucleobase-cation symporter-2, NCS2 family, at 220,965 to 223,272 10529 mRNA_2162: 10530 - K15027 EIF2D translation initiation factor 2D, at 223,612 to 225,989 10530 mRNA_2163: 10531 - K18468 VPS35 vacuolar protein sorting-associated protein 35, at 226,223 to 229,992 10531 mRNA_2164: 10532 - K10736 MCM10 minichromosome maintenance protein 10, at 230,193 to 233,259 10532
Group Condition mRNA_2160 mRNA_2161 mRNA_2162 mRNA_2163 mRNA_2164
10528 10529 10530 10531 10532
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.3 -0.1 N.D. -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.1 -0.5 N.D. -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.2 -0.3 N.D. -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 -0.2 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 -0.7 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.3 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.2 +0.2 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.4 -0.1 N.D. -0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.4 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 +0.0 N.D. -0.2
auxotrophy Dropout Complete +0.4 -0.1 -0.3 N.D. -0.3
growth on ypd YPD +0.1 +0.5 -0.3 N.D. -0.5
auxotrophy YNB Glucose +0.2 +0.3 -0.3 N.D. -0.3
growth on ricinoleic acid YNB Glucose +0.6 +0.0 -0.4 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 +0.8 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.5 N.D. -0.5
growth on oleic acid YNB Glucose +0.1 +0.1 -0.5 N.D. +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.4 +0.5 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.1 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.2 N.D. +0.6
remove
mRNA_2160
plot
remove
mRNA_2161
plot
remove
mRNA_2162
remove
mRNA_2163
plot
remove
mRNA_2164
plot