Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10530 and 10531 are separated by 233 nucleotides
10531 and 10532 are separated by 200 nucleotides
10532 and 10533 are separated by 169 nucleotides
10533 and 10534 are separated by 726 nucleotides
mRNA_2162: 10530 - K15027 EIF2D translation initiation factor 2D, at 223,612 to 225,989
10530
mRNA_2163: 10531 - K18468 VPS35 vacuolar protein sorting-associated protein 35, at 226,223 to 229,992
10531
mRNA_2164: 10532 - K10736 MCM10 minichromosome maintenance protein 10, at 230,193 to 233,259
10532
mRNA_2165: 10533 - Hypothetical Protein, at 233,429 to 233,973
10533
mRNA_2166: 10534 - Hypothetical Protein, at 234,700 to 236,014
10534
Group
Condition
mRNA
_2162
mRNA
_2163
mRNA
_2164
mRNA
_2165
mRNA
_2166
10530
10531
10532
10533
10534
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
N.D.
-1.2
-0.5
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
N.D.
-0.6
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.7
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
-1.0
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.7
N.D.
-0.4
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.4
N.D.
-0.1
-0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
-0.4
-0.2
-0.0
growth on ypd
YPD
-0.3
N.D.
-0.5
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
-0.6
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.4
N.D.
-0.2
+0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
-0.4
+0.0
+0.0
auxotrophy
YNB Glucose
-0.3
N.D.
-0.3
+0.1
-0.0
auxotrophy
Dropout Complete
-0.3
N.D.
-0.3
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
-0.2
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.2
-0.0
+0.1
growth on oleic acid
YNB Glucose
-0.5
N.D.
+0.5
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
N.D.
-0.5
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.2
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
+0.6
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
N.D.
-0.3
+0.5
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
N.D.
-0.0
+0.3
+0.1
remove
mRNA_2162
plot
remove
mRNA_2163
plot
remove
mRNA_2164
remove
mRNA_2165
plot
remove
mRNA_2166
plot