Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10532 and 10533 are separated by 169 nucleotides10533 and 10534 are separated by 726 nucleotides10534 and 10535 are separated by 217 nucleotides10535 and 10536 are separated by 54 nucleotides mRNA_2164: 10532 - K10736 MCM10 minichromosome maintenance protein 10, at 230,193 to 233,259 10532 mRNA_2165: 10533 - Hypothetical Protein, at 233,429 to 233,973 10533 mRNA_2166: 10534 - Hypothetical Protein, at 234,700 to 236,014 10534 mRNA_2167: 10535 - K03143 TFIIH3, GTF2H3, TFB4 transcription initiation factor TFIIH subunit 3, at 236,232 to 237,790 10535 mRNA_2168: 10536 - Hypothetical Protein, at 237,845 to 238,808 10536
Group Condition mRNA_2164 mRNA_2165 mRNA_2166 mRNA_2167 mRNA_2168
10532 10533 10534 10535 10536
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 -0.5 -0.2 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.7 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 +0.2 -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 -0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.1 -0.0 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.2 +0.0 N.D. +0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.0 -0.0 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.1 -0.2 N.D. +0.0
growth on ypd YPD -0.5 +0.2 +0.0 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.4 +0.0 N.D. +0.1
auxotrophy YNB Glucose -0.3 +0.1 -0.0 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.0 +0.0 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.4 -0.2 N.D. +0.2
auxotrophy Dropout Complete -0.3 +0.3 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.0 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 +0.1 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.5 +0.2 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 -0.0 N.D. +0.1
growth on oleic acid YNB Glucose +0.5 +0.2 -0.0 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.3 +0.1 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.3 -0.2 N.D. +0.2
remove
mRNA_2164
plot
remove
mRNA_2165
plot
remove
mRNA_2166
remove
mRNA_2167
plot
remove
mRNA_2168
plot