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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10534 and 10535 are separated by 217 nucleotides
10535 and 10536 are separated by 54 nucleotides
10536 and 10537 are separated by 410 nucleotides
10537 and 10538 are separated by 84 nucleotides
mRNA_2166: 10534 - Hypothetical Protein, at 234,700 to 236,014
10534
mRNA_2167: 10535 - K03143 TFIIH3, GTF2H3, TFB4 transcription initiation factor TFIIH subunit 3, at 236,232 to 237,790
10535
mRNA_2168: 10536 - Hypothetical Protein, at 237,845 to 238,808
10536
mRNA_2169: 10537 - Hypothetical Protein, at 239,219 to 240,668
10537
mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240,753 to 243,794
10538
Group
Condition
mRNA
_2166
mRNA
_2167
mRNA
_2168
mRNA
_2169
mRNA
_2170
10534
10535
10536
10537
10538
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
+0.1
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
+0.0
-0.2
+0.3
growth on ricinoleic acid
YNB Glucose
-0.0
N.D.
-0.3
+0.0
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
+0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
-0.4
+0.2
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
-0.1
+0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
+0.1
+0.2
-0.2
growth on ypd
YPD
+0.0
N.D.
-0.1
+0.1
+0.1
growth on oleic acid
YNB Glucose
-0.0
N.D.
-0.0
-0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
+0.0
-0.1
+0.2
auxotrophy
Dropout Complete
+0.1
N.D.
-0.1
-0.2
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
+0.1
-0.2
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
+0.2
+0.5
-0.1
auxotrophy
YNB Glucose
-0.0
N.D.
-0.0
+0.1
+0.5
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
+0.1
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
+0.1
+0.0
+0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.3
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
+0.3
-0.1
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
-0.2
+0.4
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
N.D.
+0.0
-0.1
+0.8
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