Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10534 and 10535 are separated by 217 nucleotides10535 and 10536 are separated by 54 nucleotides10536 and 10537 are separated by 410 nucleotides10537 and 10538 are separated by 84 nucleotides mRNA_2166: 10534 - Hypothetical Protein, at 234,700 to 236,014 10534 mRNA_2167: 10535 - K03143 TFIIH3, GTF2H3, TFB4 transcription initiation factor TFIIH subunit 3, at 236,232 to 237,790 10535 mRNA_2168: 10536 - Hypothetical Protein, at 237,845 to 238,808 10536 mRNA_2169: 10537 - Hypothetical Protein, at 239,219 to 240,668 10537 mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240,753 to 243,794 10538
Group Condition mRNA_2166 mRNA_2167 mRNA_2168 mRNA_2169 mRNA_2170
10534 10535 10536 10537 10538
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.0 -0.2 +0.3
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.3 +0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.2 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.4 +0.2 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.1 +0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.1 +0.2 -0.2
growth on ypd YPD +0.0 N.D. -0.1 +0.1 +0.1
growth on oleic acid YNB Glucose -0.0 N.D. -0.0 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.0 -0.1 +0.2
auxotrophy Dropout Complete +0.1 N.D. -0.1 -0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. +0.2 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. +0.1 -0.2 +0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.2 +0.5 -0.1
auxotrophy YNB Glucose -0.0 N.D. -0.0 +0.1 +0.5
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.1 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.1 +0.0 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. +0.3 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.3 -0.1 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -0.2 +0.4 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. +0.0 -0.1 +0.8
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