Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10535 and 10536 are separated by 54 nucleotides10536 and 10537 are separated by 410 nucleotides10537 and 10538 are separated by 84 nucleotides10538 and 10539 are separated by 419 nucleotides mRNA_2167: 10535 - K03143 TFIIH3, GTF2H3, TFB4 transcription initiation factor TFIIH subunit 3, at 236,232 to 237,790 10535 mRNA_2168: 10536 - Hypothetical Protein, at 237,845 to 238,808 10536 mRNA_2169: 10537 - Hypothetical Protein, at 239,219 to 240,668 10537 mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240,753 to 243,794 10538 mRNA_2171: 10539 - K06877 K06877 DEAD/DEAH box helicase domain-containing protein, at 244,214 to 249,218 10539
Group Condition mRNA_2167 mRNA_2168 mRNA_2169 mRNA_2170 mRNA_2171
10535 10536 10537 10538 10539
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.2 -0.0 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.0 +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 -0.2 +0.3 -0.2
auxotrophy Dropout Complete N.D. -0.1 -0.2 +0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 -0.1 +0.2 -0.2
growth on oleic acid YNB Glucose N.D. -0.0 -0.1 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.4 -0.3 +0.1
growth on ypd YPD N.D. -0.1 +0.1 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +0.2 +0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.2 +0.5 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.1 +0.4 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -0.1 +0.1 +0.1
auxotrophy YNB Glucose N.D. -0.0 +0.1 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.2 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.1 +0.5 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.5 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.1 +0.8 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.0 +0.7 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.4 +0.6 +0.1
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