Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10536 and 10537 are separated by 410 nucleotides10537 and 10538 are separated by 84 nucleotides10538 and 10539 are separated by 419 nucleotides10539 and 10540 are separated by 385 nucleotides mRNA_2168: 10536 - Hypothetical Protein, at 237,845 to 238,808 10536 mRNA_2169: 10537 - Hypothetical Protein, at 239,219 to 240,668 10537 mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240,753 to 243,794 10538 mRNA_2171: 10539 - K06877 K06877 DEAD/DEAH box helicase domain-containing protein, at 244,214 to 249,218 10539 mRNA_2172: 10540 - K00968 PCYT1 choline-phosphate cytidylyltransferase, at 249,604 to 252,159 10540
Group Condition mRNA_2168 mRNA_2169 mRNA_2170 mRNA_2171 mRNA_2172
10536 10537 10538 10539 10540
growth on ypd YPD -0.1 +0.1 +0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 -0.0 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 +0.2 -0.2 +0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.0 +0.3 -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.2 +0.3 -0.2 +0.4
auxotrophy Dropout Complete -0.1 -0.2 +0.4 -0.2 +0.4
growth on oleic acid YNB Glucose -0.0 -0.1 +0.3 -0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 +0.4 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 +0.7 -0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 +0.1 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 +0.5 -0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.1 -0.2 -0.1 +0.5
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.4 -0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.5 -0.1 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.4 -0.3 +0.1 +0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 +0.4 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 +0.5 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.4 +0.6 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.2 -0.0 +1.0
auxotrophy YNB Glucose -0.0 +0.1 +0.5 -0.2 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.8 -0.0 +0.6
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