Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10538 and 10539 are separated by 419 nucleotides10539 and 10540 are separated by 385 nucleotides10540 and 10541 are separated by 524 nucleotides10541 and 10542 are separated by 452 nucleotides mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240,753 to 243,794 10538 mRNA_2171: 10539 - K06877 K06877 DEAD/DEAH box helicase domain-containing protein, at 244,214 to 249,218 10539 mRNA_2172: 10540 - K00968 PCYT1 choline-phosphate cytidylyltransferase, at 249,604 to 252,159 10540 mRNA_2173: 10541 - K03950 NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6, at 252,684 to 253,574 10541 mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254,027 to 255,180 10542
Group Condition mRNA_2170 mRNA_2171 mRNA_2172 mRNA_2173 mRNA_2174
10538 10539 10540 10541 10542
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.1 +0.3 -2.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 +0.2 -2.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 +0.3 -1.9 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.2 +0.3 -1.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 +0.1 -1.2 -0.0
growth on ricinoleic acid YNB Glucose +0.3 -0.1 +0.4 -1.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.1 +0.3 -1.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.3 -1.1 +0.2
auxotrophy Dropout Complete +0.4 -0.2 +0.4 -1.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 +0.5 -0.3 -0.1
growth on ypd YPD +0.1 -0.1 -0.2 +0.0 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 +0.8 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.1 +0.4 -1.0 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.2 +0.4 -0.4 -0.1
growth on oleic acid YNB Glucose +0.3 -0.2 +0.4 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.0 -0.4 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 -0.0 +0.6 -1.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.1 +0.5 -0.5 +0.1
auxotrophy YNB Glucose +0.5 -0.2 +0.7 -0.7 +0.1
growth on oleic acid YNB Oleic Acid +0.4 -0.3 +0.4 +0.8 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 +1.0 +1.1 -0.0
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