Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10538 and 10539 are separated by 419 nucleotides
10539 and 10540 are separated by 385 nucleotides
10540 and 10541 are separated by 524 nucleotides
10541 and 10542 are separated by 452 nucleotides
mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240,753 to 243,794
10538
mRNA_2171: 10539 - K06877 K06877 DEAD/DEAH box helicase domain-containing protein, at 244,214 to 249,218
10539
mRNA_2172: 10540 - K00968 PCYT1 choline-phosphate cytidylyltransferase, at 249,604 to 252,159
10540
mRNA_2173: 10541 - K03950 NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6, at 252,684 to 253,574
10541
mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254,027 to 255,180
10542
Group
Condition
mRNA
_2170
mRNA
_2171
mRNA
_2172
mRNA
_2173
mRNA
_2174
10538
10539
10540
10541
10542
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.1
+0.3
-2.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.2
+0.2
-2.0
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.1
+0.3
-1.9
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.2
+0.3
-1.4
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
+0.1
-1.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.3
-0.1
+0.4
-1.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.1
+0.3
-1.5
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
+0.3
-1.1
+0.2
auxotrophy
Dropout Complete
+0.4
-0.2
+0.4
-1.3
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.5
-0.3
-0.1
growth on ypd
YPD
+0.1
-0.1
-0.2
+0.0
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.1
+0.8
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.1
+0.4
-1.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.2
+0.4
-0.4
-0.1
growth on oleic acid
YNB Glucose
+0.3
-0.2
+0.4
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
-0.0
-0.4
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
-0.0
+0.6
-1.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.1
+0.5
-0.5
+0.1
auxotrophy
YNB Glucose
+0.5
-0.2
+0.7
-0.7
+0.1
growth on oleic acid
YNB Oleic Acid
+0.4
-0.3
+0.4
+0.8
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
+1.0
+1.1
-0.0
remove
mRNA_2170
plot
remove
mRNA_2171
plot
remove
mRNA_2172
remove
mRNA_2173
plot
remove
mRNA_2174
plot