Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10539 and 10540 are separated by 385 nucleotides
10540 and 10541 are separated by 524 nucleotides
10541 and 10542 are separated by 452 nucleotides
10542 and 10543 are separated by 293 nucleotides
mRNA_2171: 10539 - K06877 K06877 DEAD/DEAH box helicase domain-containing protein, at 244,214 to 249,218
10539
mRNA_2172: 10540 - K00968 PCYT1 choline-phosphate cytidylyltransferase, at 249,604 to 252,159
10540
mRNA_2173: 10541 - K03950 NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6, at 252,684 to 253,574
10541
mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254,027 to 255,180
10542
mRNA_2175: 10543 - HMMPfam-Mus7/MMS22 family-PF09462, at 255,474 to 261,372
10543
Group
Condition
mRNA
_2171
mRNA
_2172
mRNA
_2173
mRNA
_2174
mRNA
_2175
10539
10540
10541
10542
10543
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
-2.4
-0.3
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.3
-1.9
+0.0
-1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.3
-1.4
-0.3
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
-1.2
-0.0
-1.1
auxotrophy
Dropout Complete
-0.2
+0.4
-1.3
+0.1
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.8
-0.5
-0.1
-2.0
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
-1.4
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
-2.0
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
-1.5
+0.1
+0.1
growth on ypd
YPD
-0.1
-0.2
+0.0
+0.0
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.4
-0.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.4
-0.3
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.5
-0.5
+0.1
-0.5
growth on oleic acid
YNB Glucose
-0.2
+0.4
-0.3
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
-1.0
+0.0
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
-1.1
+0.2
+0.6
auxotrophy
YNB Glucose
-0.2
+0.7
-0.7
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.6
-1.2
+0.3
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.5
-0.3
-0.1
+0.3
growth on oleic acid
YNB Oleic Acid
-0.3
+0.4
+0.8
-0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+1.0
+1.1
-0.0
+0.3
remove
mRNA_2171
plot
remove
mRNA_2172
plot
remove
mRNA_2173
remove
mRNA_2174
plot
remove
mRNA_2175
plot