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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10542 and 10543 are separated by 293 nucleotides
10543 and 10544 are separated by 924 nucleotides
10544 and 10545 are separated by 1151 nucleotides
10545 and 10546 are separated by 405 nucleotides
mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254,027 to 255,180
10542
mRNA_2175: 10543 - HMMPfam-Mus7/MMS22 family-PF09462, at 255,474 to 261,372
10543
mRNA_2176: 10544 - Hypothetical Protein, at 262,297 to 263,218
10544
mRNA_2177: 10545 - Hypothetical Protein, at 264,370 to 265,030
10545
mRNA_2178: 10546 - Hypothetical Protein, at 265,436 to 267,124
10546
Group
Condition
mRNA
_2174
mRNA
_2175
mRNA
_2176
mRNA
_2177
mRNA
_2178
10542
10543
10544
10545
10546
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-2.0
-0.4
-1.7
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.7
-0.9
+0.0
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.6
-1.0
-0.1
+0.7
auxotrophy
Dropout Complete
+0.1
-1.0
-0.5
+0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-1.1
-0.3
-0.2
+0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.4
-0.8
-0.3
+0.4
growth on ypd
YPD
+0.0
-0.6
-0.3
+0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.3
+0.7
-1.7
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
-0.4
-0.3
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.6
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.4
-0.0
-0.5
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
-0.2
+0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-1.1
+0.3
-0.0
+0.4
auxotrophy
YNB Glucose
+0.1
+0.1
-0.6
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.1
-0.4
+0.6
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.4
-0.0
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.3
+0.4
-0.4
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.5
+0.6
+0.4
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.1
+0.1
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.5
-0.6
+0.5
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.6
-0.1
-0.0
-0.0
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