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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10543 and 10544 are separated by 924 nucleotides
10544 and 10545 are separated by 1151 nucleotides
10545 and 10546 are separated by 405 nucleotides
10546 and 10547 are separated by 1099 nucleotides
mRNA_2175: 10543 - HMMPfam-Mus7/MMS22 family-PF09462, at 255,474 to 261,372
10543
mRNA_2176: 10544 - Hypothetical Protein, at 262,297 to 263,218
10544
mRNA_2177: 10545 - Hypothetical Protein, at 264,370 to 265,030
10545
mRNA_2178: 10546 - Hypothetical Protein, at 265,436 to 267,124
10546
mRNA_2179: 10547 - K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures, at 268,224 to 273,308
10547
Group
Condition
mRNA
_2175
mRNA
_2176
mRNA
_2177
mRNA
_2178
mRNA
_2179
10543
10544
10545
10546
10547
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
-0.4
-1.7
+0.5
+0.1
auxotrophy
Dropout Complete
-1.0
-0.5
+0.2
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.7
-1.7
-0.1
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-1.1
-0.3
-0.2
+0.4
+0.0
growth on ypd
YPD
-0.6
-0.3
+0.1
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.4
-0.3
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.4
-0.8
-0.3
+0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
-0.9
+0.0
+0.4
+0.4
auxotrophy
YNB Glucose
+0.1
-0.6
+0.0
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-1.0
-0.1
+0.7
+0.4
growth on oleic acid
YNB Glucose
-0.1
-0.6
+0.2
+0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
+0.3
-0.0
+0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
+0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
+0.6
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.5
+0.1
+0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
-0.1
+0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.4
-0.4
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.6
+0.5
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.0
-0.0
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.6
+0.4
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.6
-0.1
-0.0
-0.0
+0.0
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