Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10547 and 10548 are separated by 634 nucleotides10548 and 10549 are separated by 2058 nucleotides10549 and 10550 are separated by 1348 nucleotides10550 and 10551 are separated by 357 nucleotides mRNA_2179: 10547 - K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures, at 268,224 to 273,308 10547 mRNA_2180: 10548 - KOG0166 Karyopherin (importin) alpha, at 273,943 to 276,215 10548 mRNA_2181: 10549 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 278,274 to 281,386 10549 mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282,735 to 284,065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284,423 to 286,019 10551
Group Condition mRNA_2179 mRNA_2180 mRNA_2181 mRNA_2182 mRNA_2183
10547 10548 10549 10550 10551
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.1 -0.3 -0.6 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 -0.2 +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 -0.3 -0.8 +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.2 -0.4 -0.5 +0.2
auxotrophy Dropout Complete -0.1 +0.1 -0.1 -0.6 +0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.2 -0.1 -0.1
growth on oleic acid YNB Glucose -0.0 -0.2 -0.4 +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 -0.1 -0.6 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.1 -0.3 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 -0.3 -0.4 +0.2
auxotrophy YNB Glucose -0.2 +0.2 -0.1 -0.5 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 +0.3 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.4 -0.1 -0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 +0.3 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.1 -0.3 +0.6 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.1 +0.2 +0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.0 +0.1 +0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.5 +0.1 +0.0
growth on ypd YPD +0.1 +0.5 -0.2 +0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.4 +0.2 +0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 +0.0 +0.1 +0.5
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