Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10549 and 10550 are separated by 1348 nucleotides10550 and 10551 are separated by 357 nucleotides10551 and 10552 are separated by 216 nucleotides10552 and 10553 are separated by 768 nucleotides mRNA_2181: 10549 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 278,274 to 281,386 10549 mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282,735 to 284,065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284,423 to 286,019 10551 mRNA_2184: 10552 - Hypothetical Protein, at 286,236 to 287,917 10552 mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288,686 to 288,844 10553
Group Condition mRNA_2181 mRNA_2182 mRNA_2183 mRNA_2184 mRNA_2185
10549 10550 10551 10552 10553
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.6 -0.3 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 -0.3 -0.1 -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.5 +0.0 -0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.4 -0.5 +0.2 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.4 +0.2 +0.3 -0.8
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 +0.3 -0.4 -0.8
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 -0.3 -0.6 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.1 +0.0 -0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.5 +0.3 -0.2 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.6 +0.0 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.5 +0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.1 -0.1 +0.0 +0.6
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.8 +0.2 -0.2 +1.5
growth on oleic acid YNB Glucose -0.4 +0.2 -0.1 -0.1 +0.8
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.6 +0.4 -0.4 +1.7
growth on ypd YPD -0.2 +0.6 +0.1 +0.1 +0.8
auxotrophy YNB Glucose -0.1 -0.5 +0.4 -0.2 +1.8
auxotrophy Dropout Complete -0.1 -0.6 +0.1 -0.2 +2.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.3 -0.0 +0.2 +1.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.1 +0.5 +0.0 +1.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 +0.3 +0.1 +0.9
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