Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10550 and 10551 are separated by 357 nucleotides10551 and 10552 are separated by 216 nucleotides10552 and 10553 are separated by 768 nucleotides10553 and 10554 are separated by 1069 nucleotides mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282,735 to 284,065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284,423 to 286,019 10551 mRNA_2184: 10552 - Hypothetical Protein, at 286,236 to 287,917 10552 mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288,686 to 288,844 10553 mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289,914 to 291,585 10554
Group Condition mRNA_2182 mRNA_2183 mRNA_2184 mRNA_2185 mRNA_2186
10550 10551 10552 10553 10554
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.3 -0.1 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 -0.1 -1.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.0 -0.1 -0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.3 -0.4 -0.8 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.6 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.3 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.2 +0.3 -0.8 N.D.
growth on ricinoleic acid YNB Glucose -0.5 +0.2 +0.1 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.3 -0.2 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.5 +0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 +0.0 +0.1 -0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.0 +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.8 +0.2 -0.2 +1.5 N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 -0.1 +0.8 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.4 -0.4 +1.7 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.0 +0.2 +1.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 +0.1 +0.9 N.D.
growth on ypd YPD +0.6 +0.1 +0.1 +0.8 N.D.
auxotrophy YNB Glucose -0.5 +0.4 -0.2 +1.8 N.D.
auxotrophy Dropout Complete -0.6 +0.1 -0.2 +2.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 +0.0 +1.1 N.D.
remove
mRNA_2182
plot
remove
mRNA_2183
plot
remove
mRNA_2184
remove
mRNA_2185
plot
remove
mRNA_2186
plot