Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10556 and 10557 are separated by 1260 nucleotides10557 and 10558 are separated by 1468 nucleotides10558 and 10559 are separated by 841 nucleotides10559 and 10560 are separated by 220 nucleotides mRNA_2188: 10556 - Hypothetical Protein, at 294,159 to 294,788 10556 mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296,049 to 299,793 10557 mRNA_2190: 10558 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 301,262 to 303,174 10558 mRNA_2191: 10559 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 304,016 to 306,697 10559 mRNA_2192: 10560 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 306,918 to 310,071 10560
Group Condition mRNA_2188 mRNA_2189 mRNA_2190 mRNA_2191 mRNA_2192
10556 10557 10558 10559 10560
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.0 -0.4 -0.4 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.7 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 -0.3 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.5 -0.2 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 -0.0 -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +1.0 -0.4 -0.1 -0.1
growth on oleic acid YNB Glucose N.D. +0.8 +0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.9 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.5 +0.2 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +1.2 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +1.1 -0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. +1.2 +0.1 -0.1 -0.1
auxotrophy Dropout Complete N.D. +1.2 -0.0 +0.1 -0.2
growth on ypd YPD N.D. +0.8 +0.3 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +1.0 -0.1 +0.3 -0.1
auxotrophy YNB Glucose N.D. +1.2 -0.0 +0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. +1.0 +0.5 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +2.1 -0.0 -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +1.8 +0.3 +0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +2.9 +0.5 -0.1 +0.1
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