Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10557 and 10558 are separated by 1468 nucleotides10558 and 10559 are separated by 841 nucleotides10559 and 10560 are separated by 220 nucleotides10560 and 10561 are separated by 148 nucleotides mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296,049 to 299,793 10557 mRNA_2190: 10558 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 301,262 to 303,174 10558 mRNA_2191: 10559 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 304,016 to 306,697 10559 mRNA_2192: 10560 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 306,918 to 310,071 10560 mRNA_2193: 10561 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 310,220 to 312,834 10561
Group Condition mRNA_2189 mRNA_2190 mRNA_2191 mRNA_2192 mRNA_2193
10557 10558 10559 10560 10561
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.4 -0.4 +0.5 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.7 -0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.3 +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 -0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 -0.1 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 -0.0 +0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy +1.0 -0.4 -0.1 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.2 +0.1 +0.1 +0.0
growth on oleic acid YNB Glucose +0.8 +0.1 -0.0 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 +0.1 -0.2 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +1.0 -0.1 +0.3 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +1.2 -0.1 -0.1 -0.2 +0.3
growth on oleic acid YNB Oleic Acid +1.2 +0.1 -0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +1.1 -0.0 -0.0 -0.1 +0.6
auxotrophy Dropout Complete +1.2 -0.0 +0.1 -0.2 +0.5
growth on ypd YPD +0.8 +0.3 +0.1 -0.1 +0.6
growth on ricinoleic acid YNB Glucose +1.0 +0.5 -0.2 +0.2 +0.2
auxotrophy YNB Glucose +1.2 -0.0 +0.1 -0.2 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +2.1 -0.0 -0.3 +0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +1.8 +0.3 +0.4 -0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +2.9 +0.5 -0.1 +0.1 +0.3
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