Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10562 and 10563 are separated by 1358 nucleotides10563 and 10564 are separated by 316 nucleotides10564 and 10565 are separated by 775 nucleotides10565 and 10566 are separated by 641 nucleotides mRNA_2194: 10562 - BLAST ER to Golgi transport-related protein, putative [Cryp..., at 313,322 to 318,107 10562 mRNA_2195: 10563 - HMMPfam-Subtilase family-PF00082,HMMPfam-PA domain-PF02225,HMMPfam-Fn3-like domain (DUF1034)-PF06280,PRINTS-Subtilisin serine protease family (S8) signature-PR00723,ProSitePatterns-Serine proteases, subtilase family, aspartic acid active site.-PS00136,ProSitePatterns-Serine proteases, subtilase family, histidine active site.-PS00137,SUPERFAMILY--SSF52025,SUPERFAMILY--SSF52743, at 319,466 to 323,008 10563 mRNA_2196: 10564 - HMMPfam-Bromodomain associated-PF07524, at 323,325 to 326,120 10564 mRNA_2197: 10565 - K20042 FCHO F-BAR domain only protein, at 326,896 to 330,044 10565 mRNA_2198: 10566 - Hypothetical Protein, at 330,686 to 331,336 10566
Group Condition mRNA_2194 mRNA_2195 mRNA_2196 mRNA_2197 mRNA_2198
10562 10563 10564 10565 10566
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 +0.1 -0.3 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.1 -0.7 -0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 -0.3 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 -0.4 +0.5 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.0 +0.0 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 -0.0 -0.1 -0.3
auxotrophy YNB Glucose -0.1 +0.1 -0.4 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 +0.2 -0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.4 -0.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.2 +0.1 +0.1 -0.3
growth on ricinoleic acid YNB Glucose +0.2 -0.2 -0.5 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.2 -0.1 -0.1
growth on ypd YPD +0.0 +0.0 -0.4 +0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.3 -0.4 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.0 +0.1 -0.1 +0.2
auxotrophy Dropout Complete -0.1 +0.0 +0.0 -0.4 +0.5
growth on oleic acid YNB Glucose +0.1 +0.2 -0.4 -0.5 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 -0.0 +0.4 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 +0.9 -0.9 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 +0.3 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.1 +0.1 +0.6
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