Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10563 and 10564 are separated by 316 nucleotides10564 and 10565 are separated by 775 nucleotides10565 and 10566 are separated by 641 nucleotides10566 and 10567 are separated by 591 nucleotides mRNA_2195: 10563 - HMMPfam-Subtilase family-PF00082,HMMPfam-PA domain-PF02225,HMMPfam-Fn3-like domain (DUF1034)-PF06280,PRINTS-Subtilisin serine protease family (S8) signature-PR00723,ProSitePatterns-Serine proteases, subtilase family, aspartic acid active site.-PS00136,ProSitePatterns-Serine proteases, subtilase family, histidine active site.-PS00137,SUPERFAMILY--SSF52025,SUPERFAMILY--SSF52743, at 319,466 to 323,008 10563 mRNA_2196: 10564 - HMMPfam-Bromodomain associated-PF07524, at 323,325 to 326,120 10564 mRNA_2197: 10565 - K20042 FCHO F-BAR domain only protein, at 326,896 to 330,044 10565 mRNA_2198: 10566 - Hypothetical Protein, at 330,686 to 331,336 10566 mRNA_2199: 10567 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 331,928 to 335,323 10567
Group Condition mRNA_2195 mRNA_2196 mRNA_2197 mRNA_2198 mRNA_2199
10563 10564 10565 10566 10567
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.7 -0.3 -0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.3 -0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 -0.3 -0.7 +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.5 +0.1 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.4 -0.4 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 -0.1 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.0 -0.6 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 +0.5 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.1 -0.3 -0.1
growth on ypd YPD +0.0 -0.4 +0.2 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 -0.1 -0.1 -0.1
auxotrophy YNB Glucose +0.1 -0.4 -0.1 +0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3 -0.4 +0.7 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.9 -0.9 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.4 +0.1 +0.0
growth on oleic acid YNB Glucose +0.2 -0.4 -0.5 +0.7 +0.0
auxotrophy Dropout Complete +0.0 +0.0 -0.4 +0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 -0.1 +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.3 +0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.0 +0.4 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.1 +0.6 -0.0
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