Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10565 and 10566 are separated by 641 nucleotides10566 and 10567 are separated by 591 nucleotides10567 and 10568 are separated by 243 nucleotides10568 and 10569 are separated by 236 nucleotides mRNA_2197: 10565 - K20042 FCHO F-BAR domain only protein, at 326,896 to 330,044 10565 mRNA_2198: 10566 - Hypothetical Protein, at 330,686 to 331,336 10566 mRNA_2199: 10567 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 331,928 to 335,323 10567 mRNA_2200: 10568 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 335,567 to 339,379 10568 mRNA_2201: 10569 - K03005 RPA49, POLR1E DNA-directed RNA polymerase I subunit RPA49, at 339,616 to 341,199 10569
Group Condition mRNA_2197 mRNA_2198 mRNA_2199 mRNA_2200 mRNA_2201
10565 10566 10567 10568 10569
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.7 +0.2 -0.5 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.1 +0.0 -0.8 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.5 -0.1 -1.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.1 -0.7 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 -0.1 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.5 -0.1 -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.6 -0.1 +0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.3 -0.0 +0.2 +0.1
growth on ypd YPD +0.2 -0.0 -0.1 -0.4 -0.4
auxotrophy Dropout Complete -0.4 +0.5 -0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 -0.1 -0.9 +0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 +0.2 +0.0
growth on oleic acid YNB Glucose -0.5 +0.7 +0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 -0.0 -0.1 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.0 +0.1 +0.1 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.1 +0.1 -0.4 -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.1 +0.1 -0.2
auxotrophy YNB Glucose -0.1 +0.1 +0.0 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.6 -0.0 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.7 +0.0 +0.4 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 +0.0 +0.6 +0.1
remove
mRNA_2197
plot
remove
mRNA_2198
plot
remove
mRNA_2199
remove
mRNA_2200
plot
remove
mRNA_2201
plot