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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10567 and 10568 are separated by 243 nucleotides
10568 and 10569 are separated by 236 nucleotides
10569 and 10570 are separated by 318 nucleotides
10570 and 10571 are separated by 321 nucleotides
mRNA_2199: 10567 - K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6, at 331,928 to 335,323
10567
mRNA_2200: 10568 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 335,567 to 339,379
10568
mRNA_2201: 10569 - K03005 RPA49, POLR1E DNA-directed RNA polymerase I subunit RPA49, at 339,616 to 341,199
10569
mRNA_2202: 10570 - K00365 uaZ urate oxidase, at 341,518 to 342,881
10570
mRNA_2203: 10571 - K13339 PEX6, PXAAA1 peroxin-6, at 343,203 to 347,570
10571
Group
Condition
mRNA
_2199
mRNA
_2200
mRNA
_2201
mRNA
_2202
mRNA
_2203
10567
10568
10569
10570
10571
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-1.1
-0.1
-0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.8
-0.5
-0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.5
-0.8
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.7
-0.6
+0.3
N.D.
growth on ypd
YPD
-0.1
-0.4
-0.4
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.4
-0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.9
+0.8
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
-0.1
+0.1
N.D.
auxotrophy
Dropout Complete
-0.1
-0.3
-0.2
+0.4
N.D.
growth on oleic acid
YNB Glucose
+0.0
-0.1
-0.2
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
+0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
+0.1
-0.2
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
+0.1
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.4
-0.2
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
+0.0
+0.4
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.2
+0.1
+0.2
N.D.
auxotrophy
YNB Glucose
+0.0
+0.2
+0.0
+0.5
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.4
+0.1
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
+0.6
+0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.6
+0.1
+0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.8
+0.9
N.D.
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