Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10570 and 10571 are separated by 321 nucleotides10571 and 10572 are separated by 267 nucleotides10572 and 10573 are separated by 496 nucleotides10573 and 10574 are separated by 705 nucleotides mRNA_2202: 10570 - K00365 uaZ urate oxidase, at 341,518 to 342,881 10570 mRNA_2203: 10571 - K13339 PEX6, PXAAA1 peroxin-6, at 343,203 to 347,570 10571 mRNA_2204: 10572 - K03786 aroQ, qutE 3-dehydroquinate dehydratase II, at 347,838 to 348,942 10572 mRNA_2205: 10573 - KOG0381 HMG box-containing protein, at 349,439 to 350,135 10573 mRNA_2206: 10574 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 350,841 to 352,829 10574
Group Condition mRNA_2202 mRNA_2203 mRNA_2204 mRNA_2205 mRNA_2206
10570 10571 10572 10573 10574
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.2 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.5 N.D. +0.1
growth on ypd YPD +0.2 N.D. -0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. -0.0 N.D. -0.2
growth on oleic acid YNB Glucose +0.3 N.D. -0.0 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. +0.1 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.3 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.1 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.3 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 N.D. +0.2 N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.3 N.D. +0.3 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.5 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 N.D. -0.2 N.D. -0.0
auxotrophy Dropout Complete +0.4 N.D. +0.2 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. -0.0 N.D. +0.4
auxotrophy YNB Glucose +0.5 N.D. +0.3 N.D. +0.1
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