Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10573 and 10574 are separated by 705 nucleotides10574 and 10575 are separated by 277 nucleotides10575 and 10576 are separated by 238 nucleotides10576 and 10577 are separated by 678 nucleotides mRNA_2205: 10573 - KOG0381 HMG box-containing protein, at 349,439 to 350,135 10573 mRNA_2206: 10574 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 350,841 to 352,829 10574 mRNA_2207: 10575 - K08284 MID1 calcium channel MID1, at 353,107 to 355,052 10575 mRNA_2208: 10576 - K13621 BTA1 betaine lipid synthase, at 355,291 to 358,512 10576 mRNA_2209: 10577 - K14157 AASS alpha-aminoadipic semialdehyde synthase, at 359,191 to 363,010 10577
Group Condition mRNA_2205 mRNA_2206 mRNA_2207 mRNA_2208 mRNA_2209
10573 10574 10575 10576 10577
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 -0.5 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.2 -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.1 -0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.3 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.1 -0.3 +0.0
growth on oleic acid YNB Glucose N.D. -0.2 +0.0 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.2 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 -0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.4 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.0 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.0 -0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 -0.1 -0.0 +0.3
auxotrophy YNB Glucose N.D. +0.1 -0.1 -0.1 +0.2
auxotrophy Dropout Complete N.D. +0.2 -0.0 -0.3 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.2 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.4 +0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.5 -0.0 -0.0
growth on ypd YPD N.D. -0.1 +0.2 +0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.0 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.5 +0.1 +0.2
remove
mRNA_2205
plot
remove
mRNA_2206
plot
remove
mRNA_2207
remove
mRNA_2208
plot
remove
mRNA_2209
plot