Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10578 and 10579 are separated by 344 nucleotides10579 and 10580 are separated by 665 nucleotides10580 and 10581 are separated by 336 nucleotides10581 and 10582 are separated by 676 nucleotides mRNA_2210: 10578 - K20407 MIOS, MIO WD repeat-containing protein mio, at 363,303 to 367,211 10578 mRNA_2211: 10579 - K09486 HYOU1 hypoxia up-regulated 1, at 367,556 to 370,614 10579 mRNA_2212: 10580 - K04441 P38 p38 MAP kinase, at 371,280 to 373,458 10580 mRNA_2213: 10581 - Hypothetical Protein, at 373,795 to 375,886 10581 mRNA_2214: 10582 - K06970 rlmF 23S rRNA (adenine1618-N6)-methyltransferase, at 376,563 to 378,868 10582
Group Condition mRNA_2210 mRNA_2211 mRNA_2212 mRNA_2213 mRNA_2214
10578 10579 10580 10581 10582
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.5 -3.4 -0.2 N.D.
auxotrophy Dropout Complete +0.2 -0.6 -2.9 -0.2 N.D.
auxotrophy YNB Glucose +0.2 +0.3 -3.4 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.5 -0.5 -3.1 +0.1 N.D.
growth on oleic acid YNB Glucose +0.2 -0.5 -1.8 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -2.3 +0.4 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.7 -1.6 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -1.1 -0.8 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.6 -2.2 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.6 -0.8 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.6 -2.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.7 +0.1 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.2 -2.1 +0.8 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -1.0 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -1.0 +0.1 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.8 +0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 +0.0 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.7 -0.9 +0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.5 +0.9 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.9 +0.1 N.D.
growth on ypd YPD +0.2 +0.7 -0.0 +0.0 N.D.
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