Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10581 and 10582 are separated by 676 nucleotides10582 and 10583 are separated by 138 nucleotides10583 and 10584 are separated by 367 nucleotides10584 and 10585 are separated by 794 nucleotides mRNA_2213: 10581 - Hypothetical Protein, at 373,795 to 375,886 10581 mRNA_2214: 10582 - K06970 rlmF 23S rRNA (adenine1618-N6)-methyltransferase, at 376,563 to 378,868 10582 mRNA_2215: 10583 - K01737 queD, ptpS, PTS 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase, at 379,007 to 379,807 10583 mRNA_2216: 10584 - BLAST Oligosaccharide translocation protein RFT1 [Termitomy..., at 380,175 to 381,550 10584 mRNA_2217: 10585 - KOG2199 Signal transducing adaptor protein STAM/STAM2, at 382,345 to 384,541 10585
Group Condition mRNA_2213 mRNA_2214 mRNA_2215 mRNA_2216 mRNA_2217
10581 10582 10583 10584 10585
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.9 -0.6 -0.0
growth on oleic acid YNB Glucose -0.0 N.D. +0.3 -1.0 -0.4
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.1 -0.3 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 N.D. -0.3 -0.2 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.2 -0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. -0.2 -0.2 -1.0
auxotrophy Dropout Complete -0.2 N.D. -0.2 +0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.2 +0.0 -0.5
auxotrophy YNB Glucose -0.1 N.D. +0.2 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. +0.1 -0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.6 N.D. +0.1 -0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.1 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.4 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.0 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.1 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.1 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. +0.3 +0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.3 +0.1 -0.1
growth on ypd YPD +0.0 N.D. -0.1 +0.4 +0.2
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.6 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. +0.1 -0.1 +0.7
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