Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10581 and 10582 are separated by 676 nucleotides
10582 and 10583 are separated by 138 nucleotides
10583 and 10584 are separated by 367 nucleotides
10584 and 10585 are separated by 794 nucleotides
mRNA_2213: 10581 - Hypothetical Protein, at 373,795 to 375,886
10581
mRNA_2214: 10582 - K06970 rlmF 23S rRNA (adenine1618-N6)-methyltransferase, at 376,563 to 378,868
10582
mRNA_2215: 10583 - K01737 queD, ptpS, PTS 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase, at 379,007 to 379,807
10583
mRNA_2216: 10584 - BLAST Oligosaccharide translocation protein RFT1 [Termitomy..., at 380,175 to 381,550
10584
mRNA_2217: 10585 - KOG2199 Signal transducing adaptor protein STAM/STAM2, at 382,345 to 384,541
10585
Group
Condition
mRNA
_2213
mRNA
_2214
mRNA
_2215
mRNA
_2216
mRNA
_2217
10581
10582
10583
10584
10585
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-0.9
-0.6
-0.0
growth on oleic acid
YNB Glucose
-0.0
N.D.
+0.3
-1.0
-0.4
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
-0.1
-0.3
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
N.D.
-0.3
-0.2
-0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
+0.2
-0.6
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
N.D.
-0.2
-0.2
-1.0
auxotrophy
Dropout Complete
-0.2
N.D.
-0.2
+0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
-0.2
+0.0
-0.5
auxotrophy
YNB Glucose
-0.1
N.D.
+0.2
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
N.D.
+0.1
-0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
N.D.
+0.1
-0.6
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
-0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
N.D.
-0.4
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.0
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
-0.1
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.1
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.4
N.D.
+0.3
+0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
+0.3
+0.1
-0.1
growth on ypd
YPD
+0.0
N.D.
-0.1
+0.4
+0.2
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
+0.6
-0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.1
-0.1
+0.7
remove
mRNA_2213
plot
remove
mRNA_2214
plot
remove
mRNA_2215
remove
mRNA_2216
plot
remove
mRNA_2217
plot