Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10587 and 10588 are separated by 406 nucleotides10588 and 10589 are separated by 281 nucleotides10589 and 10590 are separated by 249 nucleotides10590 and 10591 are separated by 122 nucleotides mRNA_2219: 10587 - Hypothetical Protein, at 386,723 to 388,300 10587 mRNA_2220: 10588 - K14411 MSI RNA-binding protein Musashi, at 388,707 to 390,951 10588 mRNA_2221: 10589 - KOG0379 Kelch repeat-containing proteins, at 391,233 to 393,813 10589 mRNA_2222: 10590 - K14801 TSR4 pre-rRNA-processing protein TSR4, at 394,063 to 398,428 10590 mRNA_2223: 10591 - Hypothetical Protein, at 398,551 to 400,277 10591
Group Condition mRNA_2219 mRNA_2220 mRNA_2221 mRNA_2222 mRNA_2223
10587 10588 10589 10590 10591
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 N.D. -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 N.D. +0.1 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.2 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 N.D. +0.4 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.2 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -0.0 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.2 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.2 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.0 N.D. -0.0
growth on oleic acid YNB Glucose +0.1 N.D. +0.2 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.6 N.D. -0.1 N.D. -0.1
auxotrophy Dropout Complete +0.5 N.D. +0.2 N.D. -0.3
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.4 N.D. -0.2
auxotrophy YNB Glucose +0.2 N.D. +0.5 N.D. -0.1
growth on ypd YPD +0.2 N.D. +0.4 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. +0.3 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.7 N.D. +0.3 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +1.2 N.D. +0.3 N.D. -0.1
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