Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10588 and 10589 are separated by 281 nucleotides10589 and 10590 are separated by 249 nucleotides10590 and 10591 are separated by 122 nucleotides10591 and 10592 are separated by 291 nucleotides mRNA_2220: 10588 - K14411 MSI RNA-binding protein Musashi, at 388,707 to 390,951 10588 mRNA_2221: 10589 - KOG0379 Kelch repeat-containing proteins, at 391,233 to 393,813 10589 mRNA_2222: 10590 - K14801 TSR4 pre-rRNA-processing protein TSR4, at 394,063 to 398,428 10590 mRNA_2223: 10591 - Hypothetical Protein, at 398,551 to 400,277 10591 mRNA_2224: 10592 - KOG2653 6-phosphogluconate dehydrogenase, at 400,569 to 403,367 10592
Group Condition mRNA_2220 mRNA_2221 mRNA_2222 mRNA_2223 mRNA_2224
10588 10589 10590 10591 10592
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 N.D. -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 N.D. -0.3 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 N.D. -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 N.D. +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 N.D. -0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 N.D. -0.0 +0.0
growth on oleic acid YNB Oleic Acid N.D. +0.1 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.1 -0.0
auxotrophy Dropout Complete N.D. +0.2 N.D. -0.3 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 N.D. -0.4 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.3 N.D. +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 N.D. -0.2 +0.1
growth on oleic acid YNB Glucose N.D. +0.2 N.D. +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 N.D. -0.1 +0.2
auxotrophy YNB Glucose N.D. +0.5 N.D. -0.1 +0.2
growth on ypd YPD N.D. +0.4 N.D. +0.1 +0.0
remove
mRNA_2220
plot
remove
mRNA_2221
plot
remove
mRNA_2222
remove
mRNA_2223
plot
remove
mRNA_2224
plot