Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10589 and 10590 are separated by 249 nucleotides
10590 and 10591 are separated by 122 nucleotides
10591 and 10592 are separated by 291 nucleotides
10592 and 10593 are separated by 606 nucleotides
mRNA_2221: 10589 - KOG0379 Kelch repeat-containing proteins, at 391,233 to 393,813
10589
mRNA_2222: 10590 - K14801 TSR4 pre-rRNA-processing protein TSR4, at 394,063 to 398,428
10590
mRNA_2223: 10591 - Hypothetical Protein, at 398,551 to 400,277
10591
mRNA_2224: 10592 - KOG2653 6-phosphogluconate dehydrogenase, at 400,569 to 403,367
10592
mRNA_2225: 10593 - Hypothetical Protein, at 403,974 to 404,899
10593
Group
Condition
mRNA
_2221
mRNA
_2222
mRNA
_2223
mRNA
_2224
mRNA
_2225
10589
10590
10591
10592
10593
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
N.D.
-0.3
-0.6
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
-0.4
-0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
N.D.
+0.1
-0.4
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
N.D.
-0.3
-0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
-0.1
-0.5
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.1
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
-0.1
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
-0.2
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
-0.1
+0.0
-0.3
growth on oleic acid
YNB Glucose
+0.2
N.D.
+0.0
+0.1
-0.5
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
+0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
-0.2
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-0.4
+0.2
+0.0
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
+0.1
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
-0.0
+0.0
-0.0
auxotrophy
Dropout Complete
+0.2
N.D.
-0.3
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
N.D.
-0.4
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.4
N.D.
-0.2
+0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.1
+0.2
+0.1
growth on ypd
YPD
+0.4
N.D.
+0.1
+0.0
-0.0
auxotrophy
YNB Glucose
+0.5
N.D.
-0.1
+0.2
+0.2
remove
mRNA_2221
plot
remove
mRNA_2222
plot
remove
mRNA_2223
remove
mRNA_2224
plot
remove
mRNA_2225
plot