Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10590 and 10591 are separated by 122 nucleotides10591 and 10592 are separated by 291 nucleotides10592 and 10593 are separated by 606 nucleotides10593 and 10594 are separated by 586 nucleotides mRNA_2222: 10590 - K14801 TSR4 pre-rRNA-processing protein TSR4, at 394,063 to 398,428 10590 mRNA_2223: 10591 - Hypothetical Protein, at 398,551 to 400,277 10591 mRNA_2224: 10592 - KOG2653 6-phosphogluconate dehydrogenase, at 400,569 to 403,367 10592 mRNA_2225: 10593 - Hypothetical Protein, at 403,974 to 404,899 10593 mRNA_2226: 10594 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 405,486 to 409,218 10594
Group Condition mRNA_2222 mRNA_2223 mRNA_2224 mRNA_2225 mRNA_2226
10590 10591 10592 10593 10594
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.5 -0.3 -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.4 -0.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.6 +0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 -0.4 +0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.2 -0.3 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 -0.3 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.2 +0.1 -0.8
growth on oleic acid YNB Glucose N.D. +0.0 +0.1 -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.1 +0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 +0.0 -0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.0 -0.0 -0.1
auxotrophy Dropout Complete N.D. -0.3 +0.2 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.0 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 +0.1 +0.0 +0.2
growth on ypd YPD N.D. +0.1 +0.0 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.2 -0.2 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.1 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 +0.2 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.2 -0.1 +0.5
auxotrophy YNB Glucose N.D. -0.1 +0.2 +0.2 +0.2
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