Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10604 and 10605 are separated by 577 nucleotides10605 and 10606 are separated by 137 nucleotides10606 and 10607 are separated by 94 nucleotides10607 and 10608 are separated by 400 nucleotides mRNA_2236: 10604 - KOG3098 Uncharacterized conserved protein, at 432,656 to 434,707 10604 mRNA_2237: 10605 - KOG1794 N-Acetylglucosamine kinase, at 435,285 to 436,613 10605 mRNA_2238: 10606 - K20813 TDG thymine-DNA glycosylase, at 436,751 to 438,235 10606 mRNA_2239: 10607 - K18163 NDUFAF6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6, at 438,330 to 439,601 10607 mRNA_2240: 10608 - K13291 TUT terminal uridylyltransferase, at 440,002 to 443,977 10608
Group Condition mRNA_2236 mRNA_2237 mRNA_2238 mRNA_2239 mRNA_2240
10604 10605 10606 10607 10608
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.4 -3.3 -1.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.0 +0.1 -2.8 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.4 -0.1 -1.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.4 +0.2 -0.6 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3 -0.1 -0.5 -0.3
auxotrophy YNB Glucose +0.1 -0.3 -0.0 -0.7 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.6 -0.5 -1.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.4 -0.4 -0.6 +0.4
growth on ricinoleic acid YNB Glucose -0.4 +0.3 -0.0 -1.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.4 -0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.9 +0.2 +0.5 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 +0.3 -0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.2 -0.4 -0.3
auxotrophy Dropout Complete -0.1 -0.1 +0.3 -0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 +0.3 -0.4 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 +0.2 -0.4 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 +0.2 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.2 +0.4 +0.2 -0.2 -0.1
growth on oleic acid YNB Glucose -0.2 +0.5 -0.2 -0.0 +0.1
growth on ypd YPD -0.2 +0.4 +0.0 +0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +1.2 -0.5 +0.2 +0.4 -0.2
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