Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10608 and 10609 are separated by 492 nucleotides
10609 and 10610 are separated by 466 nucleotides
10610 and 10611 are separated by 482 nucleotides
10611 and 10612 are separated by 803 nucleotides
mRNA_2240: 10608 - K13291 TUT terminal uridylyltransferase, at 440,002 to 443,977
10608
mRNA_2241: 10609 - K12572 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit 3, at 444,470 to 447,596
10609
mRNA_2242: 10610 - Hypothetical Protein, at 448,063 to 449,685
10610
mRNA_2243: 10611 - SUPERFAMILY--SSF52266, at 450,168 to 452,098
10611
mRNA_2244: 10612 - KOG4120 G/T mismatch-specific thymine DNA glycosylase, at 452,902 to 454,246
10612
Group
Condition
mRNA
_2240
mRNA
_2241
mRNA
_2242
mRNA
_2243
mRNA
_2244
10608
10609
10610
10611
10612
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.3
+0.3
+0.3
-1.3
auxotrophy
YNB Glucose
-0.6
+0.3
+0.0
-0.2
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
+0.1
+0.1
-0.1
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.5
-0.0
+0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.3
-0.0
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.3
-0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.3
-0.1
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.4
+0.1
-0.1
-0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
+0.7
-0.4
-0.3
+0.9
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
+0.1
-0.1
+0.1
auxotrophy
Dropout Complete
-0.4
+0.6
-0.2
-0.1
-0.1
growth on ypd
YPD
-0.2
+0.0
-0.0
+0.6
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
+0.1
-0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.1
+0.3
-0.7
growth on oleic acid
YNB Oleic Acid
-0.1
+0.5
+0.1
-0.1
-0.4
growth on oleic acid
YNB Glucose
+0.1
+0.1
+0.1
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.6
+0.1
+0.0
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.5
+0.3
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
-0.0
-0.1
+0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+1.1
-0.2
+0.3
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+1.5
-0.2
-0.0
+1.3
remove
mRNA_2240
plot
remove
mRNA_2241
plot
remove
mRNA_2242
remove
mRNA_2243
plot
remove
mRNA_2244
plot