Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10609 and 10610 are separated by 466 nucleotides10610 and 10611 are separated by 482 nucleotides10611 and 10612 are separated by 803 nucleotides10612 and 10613 are separated by 943 nucleotides mRNA_2241: 10609 - K12572 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit 3, at 444,470 to 447,596 10609 mRNA_2242: 10610 - Hypothetical Protein, at 448,063 to 449,685 10610 mRNA_2243: 10611 - SUPERFAMILY--SSF52266, at 450,168 to 452,098 10611 mRNA_2244: 10612 - KOG4120 G/T mismatch-specific thymine DNA glycosylase, at 452,902 to 454,246 10612 mRNA_2245: 10613 - K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase, at 455,190 to 456,884 10613
Group Condition mRNA_2241 mRNA_2242 mRNA_2243 mRNA_2244 mRNA_2245
10609 10610 10611 10612 10613
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.3 +0.3 -1.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 +0.0 -0.1 N.D.
auxotrophy YNB Glucose +0.3 +0.0 -0.2 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.1 -0.1 -0.9 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 -0.1 -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.1 -0.1 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.3 -0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.2 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.1 +0.1 N.D.
growth on ypd YPD +0.0 -0.0 +0.6 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.1 +0.0 -0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 -0.3 +0.2 N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 -0.1 +0.0 N.D.
auxotrophy Dropout Complete +0.6 -0.2 -0.1 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.5 +0.1 -0.1 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.3 -0.1 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.4 -0.3 +0.9 N.D.
growth on ricinoleic acid YNB Glucose +0.4 -0.0 -0.1 +0.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +1.1 -0.2 +0.3 +0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.5 -0.2 -0.0 +1.3 N.D.
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