Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10613 and 10614 are separated by 362 nucleotides10614 and 10615 are separated by 194 nucleotides10615 and 10616 are separated by 351 nucleotides10616 and 10617 are separated by 348 nucleotides mRNA_2245: 10613 - K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase, at 455,190 to 456,884 10613 mRNA_2246: 10614 - K00026 MDH2 malate dehydrogenase, at 457,247 to 458,914 10614 mRNA_2247: 10615 - Hypothetical Protein, at 459,109 to 460,029 10615 mRNA_2248: 10616 - K01338 lon ATP-dependent Lon protease, at 460,381 to 463,216 10616 mRNA_2249: 10617 - K10753 ASF1 histone chaperone ASF1, at 463,565 to 464,577 10617
Group Condition mRNA_2245 mRNA_2246 mRNA_2247 mRNA_2248 mRNA_2249
10613 10614 10615 10616 10617
auxotrophy YNB Glucose 75mM Methionine N.D. -1.5 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -1.0 +0.0 -0.6 N.D.
auxotrophy YNB Glucose N.D. -1.1 -0.2 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -1.2 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.1 -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.5 +0.1 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.8 -0.3 +0.4 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.6 +0.1 -0.2 N.D.
growth on oleic acid YNB Glucose N.D. -1.0 +0.0 +0.4 N.D.
auxotrophy Dropout Complete N.D. -0.4 -0.1 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. -1.3 -0.1 +0.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 -0.3 -0.3 N.D.
growth on ypd YPD N.D. -0.2 -0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.2 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.6 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 +0.1 +0.9 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.2 +1.0 N.D.
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