Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10614 and 10615 are separated by 194 nucleotides10615 and 10616 are separated by 351 nucleotides10616 and 10617 are separated by 348 nucleotides10617 and 10618 are separated by 151 nucleotides mRNA_2246: 10614 - K00026 MDH2 malate dehydrogenase, at 457,247 to 458,914 10614 mRNA_2247: 10615 - Hypothetical Protein, at 459,109 to 460,029 10615 mRNA_2248: 10616 - K01338 lon ATP-dependent Lon protease, at 460,381 to 463,216 10616 mRNA_2249: 10617 - K10753 ASF1 histone chaperone ASF1, at 463,565 to 464,577 10617 mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464,729 to 465,798 10618
Group Condition mRNA_2246 mRNA_2247 mRNA_2248 mRNA_2249 mRNA_2250
10614 10615 10616 10617 10618
auxotrophy YNB Glucose 75mM Methionine -1.5 -0.1 -0.1 N.D. -0.1
auxotrophy YNB Glucose -1.1 -0.2 -0.0 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -1.2 -0.1 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 +0.0 -0.6 N.D. +0.5
growth on oleic acid YNB Oleic Acid -0.6 +0.1 -0.2 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.1 -0.4 N.D. -0.1
growth on ricinoleic acid YNB Glucose -1.3 -0.1 +0.9 N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.7 N.D. +0.2
growth on oleic acid YNB Glucose -1.0 +0.0 +0.4 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.3 -0.3 N.D. +0.0
growth on ypd YPD -0.2 -0.2 -0.0 N.D. -0.0
auxotrophy Dropout Complete -0.4 -0.1 -0.0 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.3 +0.4 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 -0.1 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.1 +0.9 N.D. -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 -0.3 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 +1.0 N.D. -0.7
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 -0.0 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.0 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.6 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.2 -0.1 N.D. -0.1
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