Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10614 and 10615 are separated by 194 nucleotides
10615 and 10616 are separated by 351 nucleotides
10616 and 10617 are separated by 348 nucleotides
10617 and 10618 are separated by 151 nucleotides
mRNA_2246: 10614 - K00026 MDH2 malate dehydrogenase, at 457,247 to 458,914
10614
mRNA_2247: 10615 - Hypothetical Protein, at 459,109 to 460,029
10615
mRNA_2248: 10616 - K01338 lon ATP-dependent Lon protease, at 460,381 to 463,216
10616
mRNA_2249: 10617 - K10753 ASF1 histone chaperone ASF1, at 463,565 to 464,577
10617
mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464,729 to 465,798
10618
Group
Condition
mRNA
_2246
mRNA
_2247
mRNA
_2248
mRNA
_2249
mRNA
_2250
10614
10615
10616
10617
10618
auxotrophy
YNB Glucose 75mM Methionine
-1.5
-0.1
-0.1
N.D.
-0.1
auxotrophy
YNB Glucose
-1.1
-0.2
-0.0
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-1.2
-0.1
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.0
+0.0
-0.6
N.D.
+0.5
growth on oleic acid
YNB Oleic Acid
-0.6
+0.1
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.1
-0.4
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-1.3
-0.1
+0.9
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
-0.7
N.D.
+0.2
growth on oleic acid
YNB Glucose
-1.0
+0.0
+0.4
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.3
-0.3
N.D.
+0.0
growth on ypd
YPD
-0.2
-0.2
-0.0
N.D.
-0.0
auxotrophy
Dropout Complete
-0.4
-0.1
-0.0
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.3
+0.4
N.D.
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.2
-0.1
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.1
+0.9
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.2
-0.3
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
+1.0
N.D.
-0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.0
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.2
-0.0
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.6
-0.3
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.2
-0.1
N.D.
-0.1
remove
mRNA_2246
plot
remove
mRNA_2247
plot
remove
mRNA_2248
remove
mRNA_2249
plot
remove
mRNA_2250
plot