Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10617 and 10618 are separated by 151 nucleotides
10618 and 10619 are separated by 403 nucleotides
10619 and 10620 are separated by 262 nucleotides
10620 and 10621 are separated by 264 nucleotides
mRNA_2249: 10617 - K10753 ASF1 histone chaperone ASF1, at 463,565 to 464,577
10617
mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464,729 to 465,798
10618
mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466,202 to 467,815
10619
mRNA_2252: 10620 - HMMPfam-Signal recognition particle 9 kDa protein (SRP9)-PF05486,SUPERFAMILY--SSF54762, at 468,078 to 468,584
10620
mRNA_2253: 10621 - HMMPfam-Staphylococcal nuclease homologue-PF00565,ProSiteProfiles-Thermonuclease domain profile.-PS50830,SMART-Staphylococcal nuclease homologues-SM00318,SUPERFAMILY--SSF50199, at 468,849 to 469,968
10621
Group
Condition
mRNA
_2249
mRNA
_2250
mRNA
_2251
mRNA
_2252
mRNA
_2253
10617
10618
10619
10620
10621
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.0
-1.5
N.D.
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
-1.2
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
-0.6
N.D.
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.3
-0.6
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.3
-1.1
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.4
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.0
N.D.
-0.3
auxotrophy
YNB Glucose
N.D.
-0.0
-0.4
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
-0.2
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
-0.2
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.6
+0.5
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
-0.2
N.D.
+0.4
auxotrophy
Dropout Complete
N.D.
+0.2
-0.1
N.D.
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+0.5
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.4
+0.8
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.7
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
+0.6
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.7
+0.9
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.5
+0.2
N.D.
+0.1
growth on ypd
YPD
N.D.
-0.0
+0.6
N.D.
+0.4
remove
mRNA_2249
plot
remove
mRNA_2250
plot
remove
mRNA_2251
remove
mRNA_2252
plot
remove
mRNA_2253
plot