Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10624 and 10625 are separated by 303 nucleotides10625 and 10626 are separated by 63 nucleotides10626 and 10627 are separated by 299 nucleotides10627 and 10628 are separated by 269 nucleotides mRNA_2256: 10624 - K14293 KPNB1, IPO1 importin subunit beta-1, at 472,511 to 475,600 10624 mRNA_2257: 10625 - K12626 LSM7 U6 snRNA-associated Sm-like protein LSm7, at 475,904 to 476,538 10625 mRNA_2258: 10626 - K04627 STE3 pheromone a factor receptor, at 476,602 to 477,940 10626 mRNA_2259: 10627 - K02933 RP-L6, MRPL6, rplF large subunit ribosomal protein L6, at 478,240 to 479,053 10627 mRNA_2260: 10628 - K03027 RPC40, POLR1C DNA-directed RNA polymerases I and III subunit RPAC1, at 479,323 to 480,652 10628
Group Condition mRNA_2256 mRNA_2257 mRNA_2258 mRNA_2259 mRNA_2260
10624 10625 10626 10627 10628
growth on ypd YPD N.D. N.D. -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.0 N.D. N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete N.D. N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose N.D. N.D. +0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.3 N.D. N.D.
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