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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10636 and 10637 are separated by 568 nucleotides
10637 and 10638 are separated by 455 nucleotides
10638 and 10639 overlap by 2 nucleotides
10639 and 10640 are separated by 461 nucleotides
mRNA_2268: 10636 - K11215 STE12 transcription factor STE12, at 490,121 to 491,043
10636
mRNA_2269: 10637 - Hypothetical Protein, at 491,612 to 491,803
10637
mRNA_2270: 10638 - K19833 CLA4 serine/threonine-protein kinase CLA4, at 492,259 to 494,809
10638
mRNA_2271: 10639 - Hypothetical Protein, at 494,808 to 495,275
10639
mRNA_2272: 10640 - Hypothetical Protein, at 495,737 to 495,928
10640
Group
Condition
mRNA
_2268
mRNA
_2269
mRNA
_2270
mRNA
_2271
mRNA
_2272
10636
10637
10638
10639
10640
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
-3.5
+0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.8
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
-1.5
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
-0.9
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
-0.7
-0.1
N.D.
growth on ypd
YPD
-0.5
N.D.
+0.5
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
N.D.
-0.0
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
+0.3
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
+0.5
-0.1
N.D.
growth on oleic acid
YNB Glucose
+0.0
N.D.
+0.9
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.7
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.4
N.D.
+1.1
+0.1
N.D.
auxotrophy
YNB Glucose
-0.2
N.D.
+1.5
-0.3
N.D.
auxotrophy
Dropout Complete
-0.3
N.D.
+1.6
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.4
N.D.
+1.3
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
N.D.
+1.0
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+1.6
-0.0
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
+1.8
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
+2.5
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
+3.3
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
N.D.
+3.2
+0.4
N.D.
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