Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10644 and 10645 are separated by 216 nucleotides10645 and 10646 are separated by 163 nucleotides10646 and 10647 are separated by 291 nucleotides10647 and 10648 are separated by 482 nucleotides mRNA_2276: 10644 - K02954 RP-S14, MRPS14, rpsN small subunit ribosomal protein S14, at 501,721 to 502,247 10644 mRNA_2277: 10645 - K13717 OTUD3 OTU domain-containing protein 3, at 502,464 to 504,545 10645 mRNA_2278: 10646 - KOG1118 Lysophosphatidic acid acyltransferase endophilin/SH3GL, involved in synaptic vesicle formation, at 504,709 to 506,668 10646 mRNA_2279: 10647 - K16369 CHO2 phosphatidylethanolamine N-methyltransferase, at 506,960 to 510,896 10647 mRNA_2280: 10648 - HMMPfam-B-block binding subunit of TFIIIC-PF04182, at 511,379 to 518,850 10648
Group Condition mRNA_2276 mRNA_2277 mRNA_2278 mRNA_2279 mRNA_2280
10644 10645 10646 10647 10648
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -0.5 -1.7 N.D.
growth on oleic acid YNB Glucose N.D. -0.2 -0.3 -1.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 -0.4 -1.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 -0.2 -1.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.1 -2.2 N.D.
auxotrophy Dropout Complete N.D. +0.2 +0.2 -2.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.0 -1.9 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.2 -1.9 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.4 -1.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.1 -1.2 N.D.
auxotrophy YNB Glucose N.D. +0.1 +0.2 -1.7 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.1 -1.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 +0.4 -1.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 +0.2 -1.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.4 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.3 -0.9 N.D.
growth on ypd YPD N.D. +0.1 -0.6 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.5 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.5 -0.1 N.D.
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