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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10649 and 10650 are separated by 842 nucleotides
10650 and 10651 are separated by 1636 nucleotides
10651 and 10652 are separated by 591 nucleotides
10652 and 10653 are separated by 528 nucleotides
mRNA_2281: 10649 - K12190 VPS36, EAP45 ESCRT-II complex subunit VPS36, at 519,083 to 521,393
10649
mRNA_2282: 10650 - HMMPfam-Conidiation protein 6-PF10346, at 522,236 to 522,967
10650
mRNA_2283: 10651 - KOG1674 Cyclin, at 524,604 to 524,992
10651
mRNA_2284: 10652 - Hypothetical Protein, at 525,584 to 526,132
10652
mRNA_2285: 10653 - SUPERFAMILY--SSF53300, at 526,661 to 528,036
10653
Group
Condition
mRNA
_2281
mRNA
_2282
mRNA
_2283
mRNA
_2284
mRNA
_2285
10649
10650
10651
10652
10653
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.3
-1.0
+0.3
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-2.4
-0.0
+0.0
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.7
-0.1
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-2.5
+0.3
+0.2
-0.2
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-2.2
-0.1
+0.4
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.2
+0.4
-0.1
+0.2
-0.6
growth on ypd
YPD
+0.0
-0.5
-0.3
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-1.7
+0.2
+0.3
+0.1
+0.3
auxotrophy
YNB Glucose
-1.6
-0.0
+0.3
+0.1
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
-0.2
+0.3
+0.1
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.5
+0.2
+0.2
-0.5
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
-0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
-0.2
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.8
+0.3
+0.3
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.3
+0.2
+0.1
+0.3
auxotrophy
Dropout Complete
-1.0
+0.3
+0.6
+0.2
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.7
+0.1
-0.1
-0.0
+0.1
growth on oleic acid
YNB Oleic Acid
+0.4
+0.4
-0.2
+0.1
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+1.3
-0.3
-0.2
+0.0
+0.1
growth on oleic acid
YNB Glucose
+0.4
+0.1
+0.0
+0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.6
+0.4
+0.1
+0.1
+0.2
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