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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10654 and 10655 are separated by 943 nucleotides
10655 and 10656 are separated by 1316 nucleotides
10656 and 10657 are separated by 212 nucleotides
10657 and 10658 are separated by 467 nucleotides
mRNA_2286: 10654 - Hypothetical Protein, at 528,229 to 530,268
10654
mRNA_2287: 10655 - KOG3870 Uncharacterized conserved protein, at 531,212 to 533,990
10655
mRNA_2288: 10656 - BLAST CLP1-like protein [Schizophyllum commune H4-8], at 535,307 to 535,861
10656
mRNA_2289: 10657 - KOG2454 Betaine aldehyde dehydrogenase, at 536,074 to 538,335
10657
mRNA_2290: 10658 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 538,803 to 539,885
10658
Group
Condition
mRNA
_2286
mRNA
_2287
mRNA
_2288
mRNA
_2289
mRNA
_2290
10654
10655
10656
10657
10658
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.0
N.D.
-0.7
-0.3
growth on ypd
YPD
-0.8
-0.0
N.D.
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.2
-0.3
N.D.
-0.5
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.0
-0.0
N.D.
-0.4
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
N.D.
-0.4
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.1
N.D.
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.4
N.D.
-0.2
+0.3
growth on oleic acid
YNB Glucose
-0.0
+0.0
N.D.
-0.7
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.2
N.D.
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
N.D.
-0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
N.D.
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
N.D.
-0.2
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
N.D.
-0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+0.1
N.D.
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.2
N.D.
+0.0
+0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
N.D.
-0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.0
N.D.
-0.4
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.2
N.D.
-0.4
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.3
N.D.
+0.4
+0.5
auxotrophy
YNB Glucose
-0.1
+0.4
N.D.
+0.3
+0.5
auxotrophy
Dropout Complete
+0.2
+0.3
N.D.
+0.2
+0.4
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