Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10656 and 10657 are separated by 212 nucleotides10657 and 10658 are separated by 467 nucleotides10658 and 10659 are separated by 1041 nucleotides10659 and 10660 are separated by 520 nucleotides mRNA_2288: 10656 - BLAST CLP1-like protein [Schizophyllum commune H4-8], at 535,307 to 535,861 10656 mRNA_2289: 10657 - KOG2454 Betaine aldehyde dehydrogenase, at 536,074 to 538,335 10657 mRNA_2290: 10658 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 538,803 to 539,885 10658 mRNA_2291: 10659 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 540,927 to 542,780 10659 mRNA_2292: 10660 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 543,301 to 545,980 10660
Group Condition mRNA_2288 mRNA_2289 mRNA_2290 mRNA_2291 mRNA_2292
10656 10657 10658 10659 10660
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 -0.3 -0.5 -0.2
growth on oleic acid YNB Glucose N.D. -0.7 +0.1 -0.4 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -0.0 -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 -0.1 -0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.1 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.6 -0.1 +0.4 -0.1
growth on ypd YPD N.D. -0.5 -0.3 +0.0 +0.2
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.0 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.7 -0.3 +0.7 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 +0.4 -0.5 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.2 +0.3 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.2 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.3 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.5 +0.4 +0.5 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +0.5 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.3 +0.8 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.3 +1.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.5 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.0 +1.3 +0.1
auxotrophy YNB Glucose N.D. +0.3 +0.5 +0.5 +0.2
auxotrophy Dropout Complete N.D. +0.2 +0.4 +0.7 +0.1
remove
mRNA_2288
plot
remove
mRNA_2289
plot
remove
mRNA_2290
remove
mRNA_2291
plot
remove
mRNA_2292
plot